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PDGene - Polymorphism Details
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 Study: IPDGC, 2011
 Gene: SETD1A  (KIAA0339; KMT2F; Set1; Set1A)  Entrez Gene
 Protein: SET domain containing 1A  (OTTHUMP00000197439; SET domain-containing protein 1A; hSET1A; histone-lysine N-methyltransferase SETD1A; lysine N-methyltransferase 2F; set1/Ash2 histone methyltransferase complex subunit SET1)  ProteinLink
 Chromosome: 16   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 10 August 2011
Meta-Analysis     Gene Overview
Total number of polymorphisms investigated by this study: 1

Case-Control Studies (by ethnic group)
  Genotypes
Polymorphism ID#
(Link to NCBI)
Population   G-Allele A-Allele G/G
(frequency)
G/A
(frequency)
A/A
(frequency)
 Caucasian
rs4889603 France (GWAS) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 France (REP-Immuno) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 Germany (GWAS) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 Germany (REP-Immuno) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 Iceland (REP-in silico) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 Netherlands (REP-Immuno) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 Netherlands (REP-in silico) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 UK (REP-Immuno) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 USA (NINDS-GWAS) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 USA (PROGENI/GenePD-GWAS) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 USA (REP-Immuno) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
rs4889603 UK (WTCCC2-GWAS) PD
CTR
-
-
-
-
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
0 (-)
(-) :  Either no data provided, or data otherwise not eligible for inclusion (see methods for details).
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Polymorphisms: 3446
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