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PDGene - Meta-Analysis of All Published PD Association Studies (Case-Control Only) rs11240572
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 Polymorphism: rs11240572
 Gene: PM20D1  (PARK16; FLJ32569; Cps1)  Entrez Gene
 Protein: peptidase M20 domain containing 1   ProteinLink
 Chromosome: 1   (View: 1  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  17  18  19  20  21  22  X  Y  MT)
 Status: Updated 2 October 2011 ;  ***Note that in addition to PM20D1, the genes NUCKS1, SLC41A1, and SLC45A3 in PARK16 show genome-wide significant effects in PDGene. As statistical significance is currently weaker than for PM20D1, they are not listed in the top results, but can be accessed via the PDGene search function.***
Gene Overview
 Polymorphism:
1) Summary of Allele and Genotype Distribution of all Published Association Studies (by Ethnic Group)
      Alleles Genotypes
  # Case-Control
Samples
  A-Allele
(frequency)
C-Allele
(frequency)
A/A
(frequency)
A/C
(frequency)
C/C
(frequency)
 Asian 5 PD
CTR
0.13
0.16
0.87
0.84
45 (0.017)
515 (0.026)
599 (0.224)
5307 (0.272)
2027 (0.759)
13704 (0.702)
Total 5 PD
CTR
0.13
0.16
0.87
0.84
45 (0.017)
515 (0.026)
599 (0.224)
5307 (0.272)
2027 (0.759)
13704 (0.702)

Meta-Analysis Methods      * New * Cumulative Meta-analysis
2) Forest plot for polymorphism  rs11240572

Please also see disclaimer for more information on these meta-analyses.

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Studies: 881
Genes: 915
Polymorphisms: 3446
Meta-analyses: 889
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Parkinson's disease Mutation Database
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The PDGene database is supported by a grant from The Michael J. Fox Foundation in partnership with the Alzheimer Research Forum.
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